Sloth
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Contents
Installation
Usage
Notes on the data model
Reference
Notes on workflows
Notes on softwares
Sloth
Index
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Index
A
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B
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C
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D
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E
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F
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G
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H
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I
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K
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L
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M
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N
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P
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Q
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R
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S
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T
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U
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W
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X
A
acenx() (in module sloth.inst.rowland)
add_dataset() (sloth.groups.baseh5.BaseGroup method)
add_group() (sloth.groups.baseh5.BaseGroup method)
ang2kev() (in module sloth.utils.bragg)
angle_3p() (in module sloth.math.geometry3D)
atan_gamma() (in module sloth.math.convolution1D)
avg_arrays_1d() (in module sloth.utils.arrays)
B
BaseDataset (class in sloth.groups.baseh5)
BaseGroup (class in sloth.groups.baseh5)
bragg_ev() (in module sloth.utils.bragg)
bragg_th() (in module sloth.utils.bragg)
C
checkZeroDivision() (in module sloth.utils.exceptions)
circle_3p() (in module sloth.math.geometry3D)
circle_radius() (in module sloth.math.geometry3D)
close() (sloth.groups.baseh5.RootGroup method)
colorstr() (in module sloth.utils.strings)
conv() (in module sloth.math.convolution1D)
cotdeg() (in module sloth.utils.bragg)
cp_replace() (in module sloth.utils.files)
cross() (in module sloth.math.geometry3D)
cs_h() (in module sloth.inst.rowland)
curves_to_matrix() (in module sloth.utils.arrays)
D
d_cubic() (in module sloth.utils.bragg)
d_hexagonal() (in module sloth.utils.bragg)
d_monoclinic() (in module sloth.utils.bragg)
d_orthorhombic() (in module sloth.utils.bragg)
d_tetragonal() (in module sloth.utils.bragg)
d_triclinic() (in module sloth.utils.bragg)
de_bragg() (in module sloth.utils.bragg)
det_pos_rotated() (in module sloth.inst.rowland)
dot() (in module sloth.math.geometry3D)
dThetaXZ() (in module sloth.inst.dthetaxz)
E
ene_res() (in module sloth.utils.xdata)
EntryGroup (class in sloth.groups.baseh5)
ev2wlen() (in module sloth.utils.bragg)
F
f2f() (in module sloth.calculators.qe_xtl)
FdmnesConv (class in sloth.math.convolution1D)
find_edge() (in module sloth.utils.xdata)
find_line() (in module sloth.utils.xdata)
findhkl() (in module sloth.utils.bragg)
fit_peak() (in module sloth.fit.peakfit_lmfit)
fluo_amplitude() (in module sloth.utils.xdata)
fluo_lines() (in module sloth.utils.xdata)
fluo_spectrum() (in module sloth.utils.xdata)
fluo_width() (in module sloth.utils.xdata)
G
gaussian() (in module sloth.math.convolution1D)
get_ana_dist() (sloth.inst.rowland.RowlandCircle method)
get_ana_pos() (sloth.inst.rowland.RcHoriz method)
(sloth.inst.rowland.RcVert method)
get_atoms() (in module sloth.calculators.qe_xtl)
get_axoff() (sloth.inst.rowland.RowlandCircle method)
get_axoff0() (sloth.inst.rowland.RowlandCircle method)
get_axoff_line() (sloth.inst.rowland.RowlandCircle method)
get_ay_off() (sloth.inst.rowland.RowlandCircle method)
get_az_off() (sloth.inst.rowland.RowlandCircle method)
get_bender_mot() (sloth.inst.rowland.RowlandCircle method)
get_bender_pos() (sloth.inst.rowland.RowlandCircle method)
get_cell() (in module sloth.calculators.qe_xtl)
get_chi() (sloth.inst.rowland.RowlandCircle method)
get_chi2() (sloth.inst.rowland.RowlandCircle method)
get_curves_fit() (in module sloth.fit.peakfit_lmfit)
get_det_pos() (sloth.inst.rowland.RcHoriz method)
(sloth.inst.rowland.RcVert method)
get_dspacing() (in module sloth.utils.bragg)
get_dth() (sloth.inst.rowland.RowlandCircle method)
get_efermi() (in module sloth.calculators.fdmnes)
get_element() (in module sloth.utils.xdata)
get_ene() (sloth.inst.rowland.RowlandCircle method)
get_ene_index() (in module sloth.math.convolution1D)
get_ene_off() (sloth.inst.rowland.RowlandCircle method)
get_fnames() (in module sloth.utils.files)
get_infos() (sloth.inst.rowland.RowlandCircle method)
get_line() (in module sloth.utils.xdata)
get_method() (in module sloth.calculators.qe_xtl)
get_miscut_off() (sloth.inst.rowland.RcHoriz method)
(sloth.inst.rowland.RcVert method)
get_negative_pos() (in module sloth.calculators.qe_xtl)
get_pos() (sloth.inst.rowland.RcVert method)
get_sag_off() (sloth.inst.rowland.RowlandCircle method)
get_sag_off0() (sloth.inst.rowland.RowlandCircle method)
get_sag_off_mots() (sloth.inst.rowland.RowlandCircle method)
get_theta() (sloth.inst.rowland.RowlandCircle method)
get_timestamp() (in module sloth.utils.strings)
getConsoleHandler() (in module sloth.utils.logging)
getDthetaDats() (in module sloth.inst.dthetaxz)
getFileHandler() (in module sloth.utils.logging)
getLogger() (in module sloth.utils.logging)
getMeshMasked() (in module sloth.inst.dthetaxz)
glinbroad() (in module sloth.math.convolution1D)
gridxyz() (in module sloth.math.gridxyz)
gridxyz_larch() (in module sloth.math.gridxyz)
H
h5_class (sloth.groups.baseh5.RootGroup property)
I
imax() (in module sloth.utils.arrays)
imin() (in module sloth.utils.arrays)
K
kev2ang() (in module sloth.utils.bragg)
kev2wlen() (in module sloth.utils.bragg)
L
length() (in module sloth.math.geometry3D)
LEVELS_DICT (in module sloth.utils.xdata)
lin_gamma() (in module sloth.math.convolution1D)
lines2_intersect() (in module sloth.math.geometry3D)
LINES_DICT (in module sloth.utils.xdata)
lists_to_matrix() (in module sloth.utils.arrays)
logging_basicConfig() (in module sloth.utils.logging)
lorentzian() (in module sloth.math.convolution1D)
M
main_test() (in module sloth.fit.peakfit_lmfit)
mapLine2Trans() (in module sloth.utils.xdata)
merge_arrays_1d() (in module sloth.utils.arrays)
module
sloth.calculators
sloth.calculators.fdmnes
sloth.calculators.qe_xtl
sloth.collects
sloth.fit
sloth.fit.peakfit_lmfit
sloth.groups
sloth.groups.baseh5
sloth.gui
sloth.inst
sloth.inst.dthetaxz
sloth.inst.dthetaxz_plot
sloth.inst.rowland
sloth.io
sloth.io.specfile_reader
sloth.math
sloth.math.convolution1D
sloth.math.deglitch
sloth.math.geometry3D
sloth.math.gridxyz
sloth.math.normalization
sloth.math.rotmatrix
sloth.raytracing
sloth.utils
sloth.utils.arrays
sloth.utils.bragg
sloth.utils.exceptions
sloth.utils.files
sloth.utils.logging
sloth.utils.strings
sloth.utils.xdata
N
natural_keys() (in module sloth.utils.strings)
norm1D() (in module sloth.math.normalization)
P
plane_3p() (in module sloth.math.geometry3D)
plotEffScatt() (in module sloth.inst.dthetaxz_plot)
plotScanThetaFile() (in module sloth.inst.dthetaxz_plot)
point_on_plane_projection() (in module sloth.math.geometry3D)
Q
qe2xtl() (in module sloth.calculators.qe_xtl)
R
RcHoriz (class in sloth.inst.rowland)
RcVert (class in sloth.inst.rowland)
read_fortran_namelist() (in module sloth.calculators.qe_xtl)
read_qe_in() (in module sloth.calculators.qe_xtl)
rebin_piecewise_constant() (in module sloth.utils.arrays)
remove_spikes_medfilt1d() (in module sloth.math.deglitch)
remove_spikes_pandas() (in module sloth.math.deglitch)
remove_spikes_pymca() (in module sloth.math.deglitch)
remove_spikes_silx() (in module sloth.math.deglitch)
RootGroup (class in sloth.groups.baseh5)
rotate() (in module sloth.math.rotmatrix)
rotation_matrix_numpy() (in module sloth.math.rotmatrix)
rotation_matrix_weave() (in module sloth.math.rotmatrix)
RowlandCircle (class in sloth.inst.rowland)
run() (sloth.math.convolution1D.FdmnesConv method)
S
set_dspacing() (sloth.inst.rowland.RowlandCircle method)
set_ene0() (sloth.inst.rowland.RowlandCircle method)
set_theta0() (sloth.inst.rowland.RowlandCircle method)
SHELLS (in module sloth.utils.xdata)
slice_func() (in module sloth.utils.strings)
sloth.calculators
module
sloth.calculators.fdmnes
module
sloth.calculators.qe_xtl
module
sloth.collects
module
sloth.fit
module
sloth.fit.peakfit_lmfit
module
sloth.groups
module
sloth.groups.baseh5
module
sloth.gui
module
sloth.inst
module
sloth.inst.dthetaxz
module
sloth.inst.dthetaxz_plot
module
sloth.inst.rowland
module
sloth.io
module
sloth.io.specfile_reader
module
sloth.math
module
sloth.math.convolution1D
module
sloth.math.deglitch
module
sloth.math.geometry3D
module
sloth.math.gridxyz
module
sloth.math.normalization
module
sloth.math.rotmatrix
module
sloth.raytracing
module
sloth.utils
module
sloth.utils.arrays
module
sloth.utils.bragg
module
sloth.utils.exceptions
module
sloth.utils.files
module
sloth.utils.logging
module
sloth.utils.strings
module
sloth.utils.xdata
module
SpecfileData (class in sloth.io.specfile_reader)
str2rng() (in module sloth.utils.strings)
sum_arrays_1d() (in module sloth.utils.arrays)
T
test_example() (in module sloth.groups.baseh5)
test_logger() (in module sloth.utils.logging)
theta_b() (in module sloth.utils.bragg)
U
unit() (in module sloth.math.geometry3D)
W
wfdmfile() (sloth.math.convolution1D.FdmnesConv method)
wlen2ev() (in module sloth.utils.bragg)
wlen2kev() (in module sloth.utils.bragg)
write_to_h5() (sloth.groups.baseh5.BaseGroup method)
writeScanDats() (in module sloth.inst.dthetaxz)
X
xray_bragg() (in module sloth.utils.bragg)
xray_edge() (in module sloth.utils.xdata)
xray_line() (in module sloth.utils.xdata)
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